PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS722688.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 237aa    MW: 25992.5 Da    PI: 7.3486
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS722688.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376e-1280127454
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   ++  rE+ RRdr+N++f eL +ll +    + +K +Ka+iL  Av+ + +L
  EcS722688.10  80 SKACREKLRRDRLNDKFLELASLLEPG---RPPKTDKAAILIDAVRMVTQL 127
                   5678**********************8...89**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.87476127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.75E-879132No hitNo description
Gene3DG3DSA:4.10.280.106.5E-1380150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-980127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.09E-1381152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.6E-982133IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    Send to blast
MVSPEQTNWI YDCGLIDDIA AVADGDFQVS GSGYTWPVQP LNGSTIFSTE IDGSFGESDG  60
VKENGSKKRV RTESCGTSSS KACREKLRRD RLNDKFLELA SLLEPGRPPK TDKAAILIDA  120
VRMVTQLRGE AQKLKDSNSS LQEKIKELKA EKNELRDEKQ RLKAEKEKLE HQLKATSAQP  180
NFLPPPPAMP AAFATQGQAP GNKLVPFLGY PGVAMWQFMP PAAVDTSQDH VLRPPVA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010062960.11e-174PREDICTED: transcription factor ILR3-like
SwissprotQ9FH371e-118ILR3_ARATH; Transcription factor ILR3
TrEMBLA0A059BVZ91e-160A0A059BVZ9_EUCGR; Uncharacterized protein
STRINGVIT_19s0014g05100.t011e-131(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM14372890
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-109bHLH family protein